Get meta data from object

Source: R/Object_Utilities.R

Quick function to properly pull meta.data from objects.

Fetch_Meta(object)

# S3 method for Seurat
Fetch_Meta(object)

# S3 method for liger
Fetch_Meta(object)

Arguments

object

Object of class Seurat or liger.

Value

A data.frame containing cell-level meta data

Examples

library(Seurat)
meta_data <- Fetch_Meta(object = pbmc_small)
head(meta_data, 5)
#>                   orig.ident nCount_RNA nFeature_RNA RNA_snn_res.0.8
#> ATGCCAGAACGACT SeuratProject         70           47               0
#> CATGGCCTGTGCAT SeuratProject         85           52               0
#> GAACCTGATGAACC SeuratProject         87           50               1
#> TGACTGGATTCTCA SeuratProject        127           56               0
#> AGTCAGACTGCACA SeuratProject        173           53               0
#>                letter.idents groups RNA_snn_res.1
#> ATGCCAGAACGACT             A     g2             0
#> CATGGCCTGTGCAT             A     g1             0
#> GAACCTGATGAACC             B     g2             0
#> TGACTGGATTCTCA             A     g2             0
#> AGTCAGACTGCACA             A     g2             0